Results of ConNIS and its competitors

Hanke, M., Harten, T. and Foraita, R. (2025)

Simulation Parameters

Classification metrics & parameters

Simulation Parameters

Classification metrics & parameters

Simulation Parameters

Data sources:
Wetmore KM, Price MN, Waters RJ, Lamson JS, He J, Hoover CA, Blow MJ, Bristow J, Butland G, Arkin AP, Deutschbauer A. 2015. Rapid Quantification of Mutant Fitness in Diverse Bacteria by Sequencing Randomly Bar-Coded Transposons. mBio. doi: 10.1128/mbio.00306-15
Ma Y, Pirolo M, Jana B, Mebus VH, Guardabassi L. 2024. The intrinsic macrolide resistome of Escherichia coli. Antimicrob Agents Chemother 68:e00452-24.
Rabindra KM, Young MK. 2017. Global Screening of Salmonella enterica Serovar Typhimurium Genes for Desiccation Survival. doi: 10.3389/fmicb.2017.01723
Baba T, Ara T, Hasegawa M, Takai Y, Okumura Y, Baba M, Datsenko KA, Tomita M, Wanner BL, Mori H. Construction of Escherichia coli K-12 in-frame, single-gene knockout mutants: the Keio collection. Mol Syst Biol. 2006;2:2006.0008. doi: 10.1038/msb4100050.
Porwollik S, Santiviago CA, Cheng P, Long F, Desai P, Fredlund J, et al. 2014. Defined Single-Gene and Multi-Gene Deletion Mutant Collections in Salmonella enterica sv Typhimurium. PLoS ONE 9(7): e99820. doi: 10.1371/journal.pone.0099820